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- Exchange format for LSDBs
Hi All We have been discussing with Ivo about the data format and getting into following proposal: - Use xml-elemnts and not attributes, due to extendability etc. - Add separate elements for variation aliases and sequence changes. The latter one ...
Post - Juha Muilu - 25 Nov 2009 - 09:35 - 25 comments - 0 attachments - 1 group
- LSDB minimal requirements (D3.4), compared to LOVD and the LSDB XML format
See the current XML format: http://www.gen2phen.org/wiki/lsdb-xml-data-format and workshop notes: http://www.gen2phen.org/post/lsdb-minimal-requirements-johan-discussion-... See also other LSDB/G2P check list This list is a ma ...
Post - Ivo F.A.C. Fokkema - 4 Feb 2011 - 12:37 - 16 comments - 0 attachments - 1 group
- BRIF newsletter - new issue
Our colleagues next door in the Bioresource Impact Factor special-interest group have published a new issue of the BRIF newsletter. Direct link to the PDF: http://www.gen2phen.org/system/files/private/BRIF%20Newsletter%20N%C2%B0... ...
Post - Gudmundur A Thorisson - 6 Feb 2012 - 17:01 - 0 comments - 0 attachments - 1 group
- Survey on academic outputs and unique identifiers
The organizers of an upcoming conference on unique identifiers in academia in Vilnius, Lithuania later this month have launched a survey. From the announcement : We would like to invite you to c ...
Post - Gudmundur A Thorisson - 6 Feb 2012 - 09:48 - 0 comments - 0 attachments - 1 group
- COEUS: Semantic Web Application Framework
At the University of Aveiro Bioinformatics research group we have been developing a new framework to ease Semantic Web application deployment in the life sciences: COEUS. This platform provides a "Semantic Web in a box" pac ...
Post - Pedro Lopes - 10 Jan 2012 - 11:40 - 0 comments - 0 attachments - 1 group
- Workshop report from IRISC2011 now available online
On behalf of the IRISC2011 organizers, I am pleased to announce that a comprehensive workshop report is now available: http://irisc-workshop.org/irisc2011-helsinki/workshop-report/ ...
Post - Gudmundur A Thorisson - 16 Nov 2011 - 20:59 - 0 comments - 0 attachments - 1 group
- Notes on the Workshop ‘Solving Bottlenecks in data sharing in the Life sciences’
GEN2PHEN / Open PHACTS workshop September 19 and 20, 2011 Aims: The workshop aimed to explore two directly related topics: data sharing (pushing data outwards from its source to one or other online resources) and data access&n ...
Post - Acacia Reiche - 24 Oct 2011 - 15:22 - 0 comments - 1 attachment - 0 groups
- Development of LOVD RESTful / Atom webservice
(updated 2009-10-22; includes gene listing and some updates to the output format) (updated 2009-12-27; described new additions and genomic locations) (updated 2010-02-15; described new additions and world-wide LOVD querying service) (updated 2010-0 ...
Post - Ivo F.A.C. Fokkema - 20 Apr 2010 - 11:16 - 8 comments - 0 attachments - 1 group
- IRISC2011 Helsinki workshop concluded and presenter slides available on website
The IRISC2011 workshop has been concluded, with great success. Kudos to CSC for doing an awesome job with the local organization, to our speakers and breakout chairs, and to all delegates for attending. Together we all helped to make this into ...
Post - Gudmundur A Thorisson - 15 Sep 2011 - 16:00 - 0 comments - 0 attachments - 1 group
- Number of IRISC2011 delegates now at the 50 mark - still room for more
We now have over 50 delegates registered for the IRISC2011 workshop in Helsinki next month , from a range of communities & backgrounds. Together with the superb plenary speakers who've agreed to attend, I am of ...
Post - Gudmundur A Thorisson - 25 Aug 2011 - 15:02 - 0 comments - 0 attachments - 1 group