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  At the University of Aveiro Bioinformatics research group we have been developing a new framework to ease Semantic Web application deployment in the life sciences: COEUS. This platform provides a "Semantic Web in a box" pac ...

Post - Pedro Lopes - 10 Jan 2012 - 11:40 - 0 comments - 0 attachments - 1 group

I made a prototype web service for the findis  national mutation database using rest protocol. The db is rather small ~1000 or so mutations from 37 genes. Service is implemented on Java using the  RESTeasy  framework. Source code ...

Post - Juha Muilu - 25 Nov 2009 - 12:51 - 2 comments - 0 attachments - 1 group

During my Leicester stay I did a deep analysis on the integration of D2R in Molgenis, which resulted in a short report. This report highlights D2R setup and details some custom enhancements that should be added to D2R mappings in order to create a riche ...

Post - Pedro Lopes - 21 Oct 2010 - 21:53 - 0 comments - 3 attachments - 1 group

During my stay in Leicester I analyzed some of the available tools and strategies to integrate existing systems in a Semantic Web environment. My accomplishments are reported in the attached document. Analyzed tools: OpenStructs Triplify ...

Post - Pedro Lopes - 21 Oct 2010 - 21:50 - 0 comments - 1 attachment - 1 group

This post, something of a sequel to my previous post on REST vs SOAP , discusses how web feeds (aka RSS or 'syndicated' feeds) and related Web technologies can potentially be used for a variety of G2P databasing tasks, both to enhance the overall Web ...

Post - Gudmundur A Thorisson - 10 Feb 2010 - 11:40 - 1 comment - 0 attachments - 1 group

Hi everyone! We have just launched WAVe: http://bioinformatics.ua.pt/WAVe/ ! I know this is not exactly semantic web related, but I believe it is the beginning of something in this matter. In any case, it is an initial attempt to kick-off the dev ...

Post - Pedro Lopes - 22 Apr 2010 - 09:48 - 0 comments - 0 attachments - 1 group