Search: Wiki Page, 2009
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- Developing Prototype LOVD web services at NGRL
At the National Genetics Reference Laboratory (NGRL), Manchester we are investigating the development of prototype web services to allow machine-to machine access to LOVD data. Here, I hope to provide an overview, and record some of the issues involved ...
Wiki Page - Glen Dobson - 25 Nov 2009 - 12:50 - 14 comments - 0 attachments - 1 group
- Modeling resources
UML tools and libraries ArgoUML see also UML 2.x support OWL From UML and OWL2XMI Eclipse modeling project MOSkitt TextUML - Text based UML editor for eclipse with graphviz integration XMI2 - A ...
Wiki Page - Juha Muilu - 26 Sep 2011 - 14:56 - 0 comments - 0 attachments - 0 groups
- Cafe Variome Architecture
Cafe Variome is built upon standard Web protocols and components. At the heart of Cafe Variome lies an Atom Store database (using AtomServer ), which is used to store mutation entries as they are submitted to the Cafe: A web feed is a simple XML ...
Wiki Page - Owen Lancaster - 15 Apr 2011 - 15:25 - 4 comments - 0 attachments - 1 group
- Web services and exchange formats wiki
This wiki contains documents and discussions about Gen2Phen's efforts to produce exchange formats and consistent interfaces for LSDBs. Standardising access to LSDB data is one of the core aims of Gen2Phen. Improved abilities to query, visualise a ...
Wiki Page - Administrator - 19 Jul 2011 - 08:46 - 0 comments - 0 attachments - 1 group
- Tools predicting the overal functional consequences of SNPs
This category collects together programs which evaluate the overall functional effects of SNPs. These programs commonly evaluate all the following things: intronic, 5'UTR, 3'UTR, 5-upstream. 3-downstream, splicing site and coding (synonymous or ...
Wiki Page - Päivi Rosenström - 12 Jul 2011 - 06:08 - 0 comments - 0 attachments - 1 group
- Web Service Interfaces to LSDBs - Browser Point of View
Table of Contents [ hide ] Introduction Problems Required Operations Implementation Issues This post discusses web service interfaces to Locus Specific Databases (LSDBs), from the speci ...
Wiki Page - Glen Dobson - 25 Nov 2009 - 10:00 - 4 comments - 0 attachments - 1 group
- Cafe Variome Wiki
This wiki aims to highlight the basic concepts of Cafe Variome, logged in members of the group are able to edit these pages. Interested individuals are encouraged to join the group and actively participate with any discussions regarding the project. ...
Wiki Page - Owen Lancaster - 15 Apr 2011 - 15:22 - 0 comments - 0 attachments - 1 group
- Protein level predictions 1 - Pathogenic or not predictors
This site collects together tools which predict whether the mutation changing the amino acid of the protein is considered to increase disease susceptibility or considered to be benign. Contents Programs avai ...
Wiki Page - Päivi Rosenström - 6 Oct 2010 - 15:18 - 0 comments - 0 attachments - 1 group
- Tools and methods for mapping genomic structural variation
This page concentrates on tools and methods for mapping genomic structural variation. Specific to new sequencing techniques is the unprecedented speed and short read lenghts. The new tools mapping the genomic structural variation are design ...
Wiki Page - Päivi Rosenström - 6 Oct 2010 - 15:03 - 0 comments - 0 attachments - 1 group
- Meta tools
Meta tools are tools which combine the analysis of several other prediction tools. Benefit of this is that the weaknesses of one program can be compensated by others and therefore the result is expected to be more reliable than obtained by individual pr ...
Wiki Page - Päivi Rosenström - 29 Sep 2010 - 10:34 - 0 comments - 0 attachments - 1 group