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VarioML

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This is the user and developer group for the VarioML data exchange specification for variation data. 

Researchers and Clinicians should subscribe to this group for:
- help with applying VarioML to their variation data, enabling integration and application exchange
- reporting challenging variation data description and processing problems - exactly the issues VarioML has been designed to solve 

Biomedical application developers should subscribe to this group to pool resources for bootstrapping the biomedical knowledge environment with VarioML's cutting edge methods for data integration and application exchange.   

Users of Gensearch, Alamut, Cafe Variome, Molgenis, LOVD, DmuDB, and other tools for  working with variation data should subscribe to this group for updates on applications and tools in this rapidly expanding domain.

Resources:
  • VarioML website - featuring specification and guides
  • VarioML GitHub repository - featuring open source software

Main Wiki pages:

  • Data content specifications
  • Notes

 

 

Special notices
Comments Posted by Last comment
Wiki Page

lsdb xml data format

25 Juha Muilu
posted 2nd Nov 2009
updated 2nd Nov 2011
8th Jan 2010
by Juha Muilu
Latest posts
Comments Posted by Last comment
Wiki Page

Data content specifications

Juha Muilu
posted 19th Jul 2011
updated 28th May 2012
19th Jul 2011
by Juha Muilu
Wiki Page

VarioML - Pathogenicity

Juha Muilu
posted 19th Jul 2011
updated 22nd Mar 2012
19th Jul 2011
by Juha Muilu
Wiki Page

VarioML notes

2 Juha Muilu
posted 19th Jul 2011
updated 18th Oct 2011
19th Jul 2011
by Juha Muilu
Wiki Page

LSDB - Controlled vocabulary terms

6 Juha Muilu
posted 8th Jan 2010
updated 19th Jul 2011
15th Jun 2010
by antbro
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